fastsimcoal2

fastsimcoal2 input files

1. SFS

   The SFS used for fastsimcoal were generated as described here and are available on Figshare.

2. tpl files

   The tpl files used for fastsimcoal analyses under migration models are available here:

   • low divergence

   • medium divergence

   • high divergence

   The tpl files used for fastsimcoal analyses under divergence models are available here:

   • low divergence

   • medium divergence

   • high divergence

3. est files

   The est files used for fastsimcoal analyses under migration models are available here:

   • low divergence

   • medium divergence

   • high divergence

   The est files used for fastsimcoal analyses under divergence models are available here:

   • low divergence

   • medium divergence

   • high divergence

SLURM scripts

All SLURM scripts used to run fsc2 IU HPC can be found here.

Output files

The results from fastsimcoal2 runs under migration models were summarized using the python script here and results are available here.

The results from fastsimcoal2 runs under nomigration models were summarized using the python script here and results are available here.